PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000502194
Common NameBZIP18
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family HB-other
Protein Properties Length: 200aa    MW: 22686.6 Da    PI: 8.4796
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000502194genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.93.6e-182078357
                   --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
       Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                   k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNr  +ek+
  MDP0000502194 20 KYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECpilsNIEPKQIKVWFQNRXCREKQ 78
                   5679**************************************************99996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007114.8681579IPR001356Homeobox domain
SMARTSM003891.6E-131783IPR001356Homeobox domain
SuperFamilySSF466892.48E-161983IPR009057Homeodomain-like
CDDcd000864.47E-142080No hitNo description
PfamPF000468.5E-162178IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.607.4E-182278IPR009057Homeodomain-like
CDDcd146868.01E-472111No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MAVTSSCKDG GMKMQMDNGK YVRYTPEQVE ALERLYHECP KPSSMRRQQL IRECPILSNI  60
EPKQIKVWFQ NRXCREKQRK EASRLQTVNR KLTAMNKLLM EENDRLQKQV SQLVYENTYF  120
RQHTQNATLA TTDTSCESVV TSGQHHLTAQ QHPPPRDASP AGLLSIAQET LAEFLSKATG  180
TAVEWVQLPG MKDEGEMGV*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.9440.0bud| fruit| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ1774270.0FJ177427.1 Malus x domestica putative HB8 HD-ZipIII mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001280796.11e-134homeobox-leucine zipper protein ATHB-8-like
SwissprotQ9ZU111e-109ATB15_ARATH; Homeobox-leucine zipper protein ATHB-15
TrEMBLD9ZIQ61e-134D9ZIQ6_MALDO; BZIP domain class transcription factor
STRINGVIT_04s0008g03250.t011e-116(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1957355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.31e-110HD-ZIP family protein